Last updated on 2024-08-09 06:49:59 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 0.99.6 | 20.32 | 232.77 | 253.09 | ERROR | |
| r-devel-linux-x86_64-debian-gcc | 0.99.6 | 16.59 | 164.96 | 181.55 | ERROR | |
| r-devel-linux-x86_64-fedora-clang | 0.99.6 | 417.18 | ERROR | |||
| r-devel-linux-x86_64-fedora-gcc | 0.99.6 | 435.50 | ERROR | |||
| r-devel-windows-x86_64 | 0.99.6 | 23.00 | 213.00 | 236.00 | ERROR | |
| r-patched-linux-x86_64 | 0.99.6 | 22.40 | 220.22 | 242.62 | OK | |
| r-release-linux-x86_64 | 0.99.6 | 21.97 | 223.60 | 245.57 | OK | |
| r-release-macos-arm64 | 0.99.6 | 113.00 | OK | |||
| r-release-macos-x86_64 | 0.99.6 | 159.00 | OK | |||
| r-release-windows-x86_64 | 0.99.6 | 26.00 | 213.00 | 239.00 | OK | |
| r-oldrel-macos-arm64 | 0.99.6 | 120.00 | OK | |||
| r-oldrel-macos-x86_64 | 0.99.6 | 212.00 | OK | |||
| r-oldrel-windows-x86_64 | 0.99.6 | 30.00 | 272.00 | 302.00 | OK |
Version: 0.99.6
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
...
--- re-building ‘SRTsim.Rmd’ using rmarkdown
The magick package is required to crop "/home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/SRTsim.Rcheck/vign_test/SRTsim/vignettes/SRTsim_files/figure-html/tissue simulation metrics comparison-1.png" but not available.
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/SRTsim.Rcheck/vign_test/SRTsim/vignettes/SRTsim_files/figure-html/tissue simulation metrics comparison-1.png
1536x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 162172 bytes
Input file size = 162478 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 134902
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 134902
Output IDAT size = 134902 bytes (27270 bytes decrease)
Output file size = 134980 bytes (27498 bytes = 16.92% decrease)
The magick package is required to crop "/home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/SRTsim.Rcheck/vign_test/SRTsim/vignettes/SRTsim_files/figure-html/pattern comparison-1.png" but not available.
The magick package is required to crop "/home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/SRTsim.Rcheck/vign_test/SRTsim/vignettes/SRTsim_files/figure-html/pattern comparison-2.png" but not available.
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/SRTsim.Rcheck/vign_test/SRTsim/vignettes/SRTsim_files/figure-html/pattern comparison-1.png
1536x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 356854 bytes
Input file size = 357448 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 307734
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 307734
Output IDAT size = 307734 bytes (49120 bytes decrease)
Output file size = 307812 bytes (49636 bytes = 13.89% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/SRTsim.Rcheck/vign_test/SRTsim/vignettes/SRTsim_files/figure-html/pattern comparison-2.png
1536x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 239151 bytes
Input file size = 239577 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 198156
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 198156
Output IDAT size = 198156 bytes (40995 bytes decrease)
Output file size = 198234 bytes (41343 bytes = 17.26% decrease)
Quitting from lines 148-169 (SRTsim.Rmd)
Error: processing vignette 'SRTsim.Rmd' failed with diagnostics:
subscript out of bounds
--- failed re-building ‘SRTsim.Rmd’
SUMMARY: processing the following file failed:
‘SRTsim.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-devel-linux-x86_64-debian-clang
Version: 0.99.6
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
...
--- re-building ‘SRTsim.Rmd’ using rmarkdown
The magick package is required to crop "/home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/SRTsim.Rcheck/vign_test/SRTsim/vignettes/SRTsim_files/figure-html/tissue simulation metrics comparison-1.png" but not available.
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/SRTsim.Rcheck/vign_test/SRTsim/vignettes/SRTsim_files/figure-html/tissue simulation metrics comparison-1.png
1536x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 162172 bytes
Input file size = 162478 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 134902
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 134902
Output IDAT size = 134902 bytes (27270 bytes decrease)
Output file size = 134980 bytes (27498 bytes = 16.92% decrease)
The magick package is required to crop "/home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/SRTsim.Rcheck/vign_test/SRTsim/vignettes/SRTsim_files/figure-html/pattern comparison-1.png" but not available.
The magick package is required to crop "/home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/SRTsim.Rcheck/vign_test/SRTsim/vignettes/SRTsim_files/figure-html/pattern comparison-2.png" but not available.
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/SRTsim.Rcheck/vign_test/SRTsim/vignettes/SRTsim_files/figure-html/pattern comparison-1.png
1536x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 356854 bytes
Input file size = 357448 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 307734
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 307734
Output IDAT size = 307734 bytes (49120 bytes decrease)
Output file size = 307812 bytes (49636 bytes = 13.89% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/SRTsim.Rcheck/vign_test/SRTsim/vignettes/SRTsim_files/figure-html/pattern comparison-2.png
1536x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 239151 bytes
Input file size = 239577 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 198156
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 198156
Output IDAT size = 198156 bytes (40995 bytes decrease)
Output file size = 198234 bytes (41343 bytes = 17.26% decrease)
Quitting from lines 148-169 (SRTsim.Rmd)
Error: processing vignette 'SRTsim.Rmd' failed with diagnostics:
subscript out of bounds
--- failed re-building ‘SRTsim.Rmd’
SUMMARY: processing the following file failed:
‘SRTsim.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 0.99.6
Check: package dependencies
Result: NOTE
Imports includes 22 non-default packages.
Importing from so many packages makes the package vulnerable to any of
them becoming unavailable. Move as many as possible to Suggests and
use conditionally.
Flavor: r-devel-linux-x86_64-fedora-clang
Version: 0.99.6
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
--- re-building ‘SRTsim.Rmd’ using rmarkdown
The magick package is required to crop "/data/gannet/ripley/R/packages/tests-clang/SRTsim.Rcheck/vign_test/SRTsim/vignettes/SRTsim_files/figure-html/tissue simulation metrics comparison-1.png" but not available.
** Processing: /data/gannet/ripley/R/packages/tests-clang/SRTsim.Rcheck/vign_test/SRTsim/vignettes/SRTsim_files/figure-html/tissue simulation metrics comparison-1.png
1536x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 162159 bytes
Input file size = 162465 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 134869
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 134869
Output IDAT size = 134869 bytes (27290 bytes decrease)
Output file size = 134947 bytes (27518 bytes = 16.94% decrease)
The magick package is required to crop "/data/gannet/ripley/R/packages/tests-clang/SRTsim.Rcheck/vign_test/SRTsim/vignettes/SRTsim_files/figure-html/pattern comparison-1.png" but not available.
The magick package is required to crop "/data/gannet/ripley/R/packages/tests-clang/SRTsim.Rcheck/vign_test/SRTsim/vignettes/SRTsim_files/figure-html/pattern comparison-2.png" but not available.
** Processing: /data/gannet/ripley/R/packages/tests-clang/SRTsim.Rcheck/vign_test/SRTsim/vignettes/SRTsim_files/figure-html/pattern comparison-1.png
1536x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 356854 bytes
Input file size = 357448 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 307734
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 307734
Output IDAT size = 307734 bytes (49120 bytes decrease)
Output file size = 307812 bytes (49636 bytes = 13.89% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-clang/SRTsim.Rcheck/vign_test/SRTsim/vignettes/SRTsim_files/figure-html/pattern comparison-2.png
1536x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 239151 bytes
Input file size = 239577 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 198156
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 198156
Output IDAT size = 198156 bytes (40995 bytes decrease)
Output file size = 198234 bytes (41343 bytes = 17.26% decrease)
Quitting from lines 148-169 (SRTsim.Rmd)
Error: processing vignette 'SRTsim.Rmd' failed with diagnostics:
subscript out of bounds
--- failed re-building ‘SRTsim.Rmd’
SUMMARY: processing the following file failed:
‘SRTsim.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-devel-linux-x86_64-fedora-clang
Version: 0.99.6
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
--- re-building ‘SRTsim.Rmd’ using rmarkdown
** Processing: /data/gannet/ripley/R/packages/tests-devel/SRTsim.Rcheck/vign_test/SRTsim/vignettes/SRTsim_files/figure-html/tissue simulation metrics comparison-1.png
1472x890 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 160904 bytes
Input file size = 161111 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 131856
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 131856
Output IDAT size = 131856 bytes (29048 bytes decrease)
Output file size = 132015 bytes (29096 bytes = 18.06% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-devel/SRTsim.Rcheck/vign_test/SRTsim/vignettes/SRTsim_files/figure-html/pattern comparison-1.png
1382x930 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 352713 bytes
Input file size = 352992 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 304487
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 304487
Output IDAT size = 304487 bytes (48226 bytes decrease)
Output file size = 304646 bytes (48346 bytes = 13.70% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-devel/SRTsim.Rcheck/vign_test/SRTsim/vignettes/SRTsim_files/figure-html/pattern comparison-2.png
1382x930 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 236474 bytes
Input file size = 236717 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 195189
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 195189
Output IDAT size = 195189 bytes (41285 bytes decrease)
Output file size = 195348 bytes (41369 bytes = 17.48% decrease)
Quitting from lines 148-169 (SRTsim.Rmd)
Error: processing vignette 'SRTsim.Rmd' failed with diagnostics:
subscript out of bounds
--- failed re-building ‘SRTsim.Rmd’
SUMMARY: processing the following file failed:
‘SRTsim.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-devel-linux-x86_64-fedora-gcc
Version: 0.99.6
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
--- re-building 'SRTsim.Rmd' using rmarkdown
The magick package is required to crop "D:/RCompile/CRANpkg/local/4.5/SRTsim.Rcheck/vign_test/SRTsim/vignettes/SRTsim_files/figure-html/tissue simulation metrics comparison-1.png" but not available.
The magick package is required to crop "D:/RCompile/CRANpkg/local/4.5/SRTsim.Rcheck/vign_test/SRTsim/vignettes/SRTsim_files/figure-html/pattern comparison-1.png" but not available.
The magick package is required to crop "D:/RCompile/CRANpkg/local/4.5/SRTsim.Rcheck/vign_test/SRTsim/vignettes/SRTsim_files/figure-html/pattern comparison-2.png" but not available.
Quitting from lines 148-169 (SRTsim.Rmd)
Error: processing vignette 'SRTsim.Rmd' failed with diagnostics:
subscript out of bounds
--- failed re-building 'SRTsim.Rmd'
SUMMARY: processing the following file failed:
'SRTsim.Rmd'
Error: Vignette re-building failed.
Execution halted
Flavor: r-devel-windows-x86_64