Last updated on 2024-09-14 11:49:22 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.0.1 | 46.34 | 448.17 | 494.51 | NOTE | |
| r-devel-linux-x86_64-debian-gcc | 1.0.1 | 33.63 | 314.81 | 348.44 | NOTE | |
| r-devel-linux-x86_64-fedora-clang | 1.1.0 | 607.40 | NOTE | |||
| r-devel-linux-x86_64-fedora-gcc | 1.1.0 | 402.25 | OK | |||
| r-devel-windows-x86_64 | 1.0.1 | 59.00 | 575.00 | 634.00 | NOTE | |
| r-patched-linux-x86_64 | 1.0.1 | 58.34 | 417.26 | 475.60 | OK | |
| r-release-linux-x86_64 | 1.0.1 | 47.17 | 413.71 | 460.88 | OK | |
| r-release-macos-arm64 | 1.1.0 | 164.00 | OK | |||
| r-release-macos-x86_64 | 1.1.0 | 258.00 | OK | |||
| r-release-windows-x86_64 | 1.0.1 | 55.00 | 574.00 | 629.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.0 | 250.00 | ERROR | |||
| r-oldrel-macos-x86_64 | 1.1.0 | 429.00 | ERROR | |||
| r-oldrel-windows-x86_64 | 1.0.1 | 69.00 | 620.00 | 689.00 | OK |
Version: 1.0.1
Check: Rd cross-references
Result: NOTE
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
DigitalDLSorter-class.Rd: SingleCellExperiment-class,
dgCMatrix-class, ZinbModel-class, SummarizedExperiment-class
ZinbParametersModel-class.Rd: ZinbModel-class
bulk.simul.Rd: SummarizedExperiment-class
createDDLSobject.Rd: SingleCellExperiment-class,
SummarizedExperiment-class
loadDeconvData.Rd: SummarizedExperiment-class
simSCProfiles.Rd: SingleCellExperiment-class
single.cell.real.Rd: SingleCellExperiment-class
single.cell.simul.Rd: SingleCellExperiment-class
zinb.params.Rd: ZinbModel-class
zinbwave.model.Rd: ZinbModel-class
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-windows-x86_64
Version: 1.1.0
Check: R code for possible problems
Result: NOTE
Error: there is no package called ‘Rcpp’
Call sequence:
13: doWithOneRestart(return(expr), restart)
12: withOneRestart(expr, restarts[[1L]])
11: withRestarts(stop(cond), retry_loadNamespace = function() NULL)
10: loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]])
9: asNamespace(ns)
8: namespaceImportFrom(ns, loadNamespace(j <- i[[1L]], c(lib.loc,
.libPaths()), versionCheck = vI[[j]]), i[[2L]], from = package)
7: loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]])
6: asNamespace(ns)
5: namespaceImportFrom(ns, loadNamespace(j <- i[[1L]], c(lib.loc,
.libPaths()), versionCheck = vI[[j]]), i[[2L]], from = package)
4: loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]])
3: asNamespace(ns)
2: namespaceImportFrom(ns, loadNamespace(j <- i[[1L]], c(lib.loc,
.libPaths()), versionCheck = vI[[j]]), i[[2L]], from = package)
1: loadNamespace(package, lib.loc)
Execution halted
Error in loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]) :
there is no package called ‘Rcpp’
Calls: <Anonymous>
Execution halted
Flavor: r-devel-linux-x86_64-fedora-clang
Version: 1.1.0
Check: package dependencies
Result: NOTE
Package suggested but not available for checking: ‘HDF5Array’
Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64
Version: 1.1.0
Check: Rd cross-references
Result: NOTE
Package unavailable to check Rd xrefs: ‘HDF5Array’
Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64
Version: 1.1.0
Check: running R code from vignettes
Result: ERROR
Errors in running code in vignettes:
when running code in ‘kerasIssues.Rmd’
...
> knitr::opts_chunk$set(echo = TRUE, eval = FALSE)
> tensorflow::use_condaenv("digitaldlsorter-env")
When sourcing ‘kerasIssues.R’:
Error: Unable to find conda binary. Is Anaconda installed?
Execution halted
‘hdf5Backend.Rmd’ using ‘UTF-8’... [0s/0s] OK
‘kerasIssues.Rmd’ using ‘UTF-8’... failed
‘pretrainedModels.Rmd’ using ‘UTF-8’... [0s/0s] OK
‘realModelWorkflow.Rmd’ using ‘UTF-8’... [0s/0s] OK
Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64